The detailed information of tRNA gene sequence


Sequence ID>A179000289
Genome IDCP002838
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrolobus fumarii 1A [CP002838]
Start position on genome 1759177
End posion on genome 1759068
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttacatggt
tRNA gene sequence 
GCCGCCGTAGCTCAGCTGGCAGAGCGCCGGACTCATAATCCGGAGGTCCCGGGTTCAAAT
CCCGGCGGCGGCACCA
Downstream region at tRNA end position 
cccctaaaac
Secondary structure (Cloverleaf model)
>A179000289	Met	CAT
                   t      ACCA cccctaaaac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=34 (in A-loop)
CGGTCGGCCGGTCCGCTCCGAGGCCGCCTGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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