The detailed information of tRNA gene sequence


Sequence ID>A179000331
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 2305747
End posion on genome 2305853
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
catcgttgga
tRNA gene sequence 
CCCGCCTTAACTCAGCCTGGTAGAGTGCGCGGCTGTAGACCGCGATGTCCCCGGTTCGAA
TCTGGGAGGCGGGAcct
Downstream region at tRNA end position 
tgctttgagt
Secondary structure (Cloverleaf model)
>A179000331	Tyr	GTA
                   a      Acct tgctttgagt
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G T C     A
      C G A        A      | | | + |     G
    C       C T C A       C C C G G     C
    T       | | | |                 T T
    G       G A G T
      G T A        G     ATGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=33 (in A-loop)
TAGGTTATGCACCGGATGGTGCACCGTGCGGCT
Intron
Comment/Decision
Genome/Seq. Info.-

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