The detailed information of tRNA gene sequence


Sequence ID>A179000334
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 469512
End posion on genome 469417
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgtaatcgt
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAAGGCGCAAGCCTGGAAAGCTTGTGATTCGCAAGGGTCGCG
GGAGTTCGAATCTCCCCCTCGGCGctc
Downstream region at tRNA end position 
ttttacaaat
Secondary structure (Cloverleaf model)
>A179000334	Ser	GGA
                   t      Gctc ttttacaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      T     T C T G       G G G A G     C
      G     | | + |                 T T
      G     A G G C
        T A        G     TGATTCGCAAGGGTCGC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A *
                    G G A
intron: position=38, length=12 (in A-loop)
TTCTCTACTGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK