The detailed information of tRNA gene sequence


Sequence ID>A179000364
Genome IDCP003362
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanomethylovorans hollandica DSM 15978 [CP003362]
Start position on genome 1742563
End posion on genome 1742652
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gttccatagt
tRNA gene sequence 
GGGCTCGTAGGGTAGCCAGGATATCCTAATGGGCTTCGAACCCATTGACTCGCGTTCGAA
TCGCGGCGGGCCCGctt
Downstream region at tRNA end position 
gatttattaa
Secondary structure (Cloverleaf model)
>A179000364	Arg	TCG
                   t      Gctt gatttattaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G G C G C     A
    C C G A        A      + | | | |     G
  A         T G G G       T C G C G     C
  G           | | +                 T T
  G         T C C T
    A T A          A     TGAC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    T C G
intron: position=38, length=16 (in A-loop)
AACCCATGGTGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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