The detailed information of tRNA gene sequence


Sequence ID>A179000379
Genome IDCP003423
Search identical group
Phylum/ClassThermoproteota
SpeciesFervidicoccus fontis Kam940 [CP003423]
Start position on genome 253853
End posion on genome 253962
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
taaaaggctt
tRNA gene sequence 
CCCCCCGTAGCTCAGCGGTAGAGCGGCCGGCTGTAGACCGGCAGGTCCCGGGTTCGATGC
CCGGCGGGGGGActc
Downstream region at tRNA end position 
ttccccccag
Secondary structure (Cloverleaf model)
>A179000379	Tyr	GTA
                   t      Actc ttccccccag
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          G T
                    T     G G C C C     A
        G A        A      | | | | |     G
      C     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=38 (in A-loop)
TGAGACGGCCTCCGAATTAAGGAGGAAGATCTGCCGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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