The detailed information of tRNA gene sequence


Sequence ID>A179000392
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 123006
End posion on genome 122903
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatatgttga
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGCCTAAGGGGGTAGGCTCGAGACCTACTGCCCCATACGGGGCA
CGCGGGTTCGAATCCCGCCCCCGGCGctt
Downstream region at tRNA end position 
taggcaaacc
Secondary structure (Cloverleaf model)
>A179000392	Ser	CGA
                   a      Gctt taggcaaacc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      C T A        G     TGCCCCATACGGGGCAC
                    G - C
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G *
                    C G A
intron: position=38, length=18 (in A-loop)
TTCCGGCTAGAGCGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK