The detailed information of tRNA gene sequence


Sequence ID>A179000447
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 552354
End posion on genome 552494
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
atcacgggaa
tRNA gene sequence 
CCCGCCGTAGCTCAGCGGTAGAGCGCCCGGCTGTAGACCGGGTGGCCCGGGGTTCGAGTC
CCCGCGGCGGGACCA
Downstream region at tRNA end position 
gggccaccca
Secondary structure (Cloverleaf model)
>A179000447	Tyr	GTA
                   a      ACCA gggccaccca
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
        G A        A      | | | | |     G
      C     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=66 (in A-loop)
GACCCGTACGTGGTCCACCCCCGGAGTGGGGCACTCAGCCCCCAGATGAAGGGGTGGGCAGCAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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