The detailed information of tRNA gene sequence


Sequence ID>A179000449
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 665939
End posion on genome 665833
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gatttcacga
tRNA gene sequence 
GGGCCCGTAGCTCAGCTAGGACAGAGCGCCGGCCTCCTAAGCCGGTGGTCCGGGGTTCAA
ATCCCCGCGGGCCCGCCA
Downstream region at tRNA end position 
ctaggcggag
Secondary structure (Cloverleaf model)
>A179000449	Arg	CCT
                   a      GCCA ctaggcggag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    T C G A        A      | | | | |     A
  A         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C C T
intron: position=38, length=29 (in A-loop)
TCCGTCATGCGGGGTTTCGTCGGGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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