The detailed information of tRNA gene sequence


Sequence ID>A179000460
Genome IDCP006977
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius SUSAZ [CP006977]
Start position on genome 1199390
End posion on genome 1199299
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
atattatcat
tRNA gene sequence 
GGACCCGTAGCTCAGCCAGGACAGAGCGCCGGCCTCCTAAGCCGGTGGTCCCGGGTTCAA
ATCCCGGCGGGTCCGcta
Downstream region at tRNA end position 
tacttttaat
Secondary structure (Cloverleaf model)
>A179000460	Arg	CCT
                   t      Gcta tacttttaat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C C T
intron: position=38, length=17 (in A-loop)
GTCGGCGCTGAGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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