The detailed information of tRNA gene sequence


Sequence ID>A179000482
Genome IDCP007493
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1505 [CP007493]
Start position on genome 1572565
End posion on genome 1572677
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gaaacccctt
tRNA gene sequence 
GGGCCCGTAGCGCAGTTAGGAAGCGCGGCGGCCTTCTAAGCCGCAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
tcaaaacatt
Secondary structure (Cloverleaf model)
>A179000482	Arg	TCT
                   t      GCCA tcaaaacatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       C G C G       C C G G G     C
    A       | | | |                 T T
    G       G C G C
      G A A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=36 (in A-loop)
GGCCGAAAAACCGCGAACAACACAAAACACGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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