The detailed information of tRNA gene sequence


Sequence ID>A179000539
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1497320
End posion on genome 1497416
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgttatttga
tRNA gene sequence 
GGGCCGGTCGTCTAGCGGGAGGATGTCGCCTTCGCACGGCGGAGGTCCCGGGTTCGAATC
CCGGCCGGTCCActc
Downstream region at tRNA end position 
tctatatttt
Secondary structure (Cloverleaf model)
>A179000539	Ala	CGC
                   a      Actc tctatatttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        C      | | | | |     G
      C     T C T G       C C G G G     C
      G     + | | +                 T T
      G     G G A T
        G A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A *
                    C G C
intron: position=38, length=25 (in A-loop)
AGGGCTAATGTAGGGGCTCCGAGTA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK