The detailed information of tRNA gene sequence


Sequence ID>A179000558
Genome IDCP010514
Search identical group
Phylum/ClassNanoarchaeota
SpeciesCandidatus Nanopusillus acidilobi 7A [CP010514]
Start position on genome 302941
End posion on genome 303035
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ataataaata
tRNA gene sequence 
CCGGGCGTAGCTCAGCCCTGGTAGAGCGGCCGGCTGTAGACCGGCAGGTCGTGGGTTCAA
GTCCCACCGCCCGGActt
Downstream region at tRNA end position 
ttatttttat
Secondary structure (Cloverleaf model)
>A179000558	Tyr	GTA
                   a      Actt ttatttttat
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       G T G G G     C
  T         | | | |                 T T
  G         G A G C
    G T A          G     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T A
intron: position=38, length=20 (in A-loop)
TGGTTAAATTGGCCGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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