The detailed information of tRNA gene sequence


Sequence ID>A179000662
Genome IDCP017006
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20 [CP017006]
Start position on genome 796896
End posion on genome 796984
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attttaagat
tRNA gene sequence 
GGACCCGTAGCTCAGCCAGGACGGAGCGCCGGCCTTCTAAGCCGGCGGTCCCGGGTTCAA
ATCCCGGCGGGTCCGcac
Downstream region at tRNA end position 
atattatttt
Secondary structure (Cloverleaf model)
>A179000662	Arg	TCT
                   t      Gcac atattatttt
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C G          G     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=14 (in A-loop)
GCGTCCAGGAGGTA
Intron
Comment/Decision
Genome/Seq. Info.-

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