The detailed information of tRNA gene sequence


Sequence ID>A179000692
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1552398
End posion on genome 1552284
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attcgcgcat
tRNA gene sequence 
GCGGGGATGCCCGAGCATGGTCAAAGGGGGCGGACTTAAGATCCGCTGGCGAAGGCCTGC
GTGGGTCCGAATCCCACTCCCCGCAttt
Downstream region at tRNA end position 
aaaattacaa
Secondary structure (Cloverleaf model)
>A179000692	Leu	TAA
                   t      Attt aaaattacaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    A C G A        G      | | | | |     G
  T         G C C C       G T G G G     C
  G           | | |                 T C
  G         A G G G
    T C A A        G     TGGCGAAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=30 (in A-loop)
TTGTTACCTAAGTCCCCCTTTGCATAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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