The detailed information of tRNA gene sequence


Sequence ID>A173000082
Genome IDCP002916
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon BRNA1 [CP002916]
Start position on genome 1086292
End posion on genome 1086367
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtttcagtc
tRNA gene sequence 
GTCCCGGTAGTGTAGCGGCCTATCATGAGGCCCTGTCGAGGCCTCGACACGGATTCGAAT
TCCGTCCGGGACGCCA
Downstream region at tRNA end position 
gttcttatct
Secondary structure (Cloverleaf model)
>A173000082	Asp	GTC
                   c      GCCA gttcttatct
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C T     A
      C G A        A      | | | | |     G
    G       T G T G       A C G G A     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    A - T
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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