The detailed information of tRNA gene sequence


Sequence ID>A172000001
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 1403711
End posion on genome 1403802
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ggtttttcta
tRNA gene sequence 
GCGGCGGTAGTCTAGCCTGGTTTAGGATGGCGGCCTCCCAAGCCGTTGATCCCGGGTTCG
AATCCCGGCCGCCGCAtgg
Downstream region at tRNA end position 
gtaaagtttt
Secondary structure (Cloverleaf model)
>A172000001	Gly	CCC
                   a      Atgg gtaaagtttt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T A        G     TGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C C C
intron: position=38, length=16 (in A-loop)
CGCTACGGGCGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK