The detailed information of tRNA gene sequence


Sequence ID>A172000011
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 3976
End posion on genome 4070
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tcatattgac
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATGCGGGGCTCTGGCCCCCGTGACCGGGGTTCGAAT
CCCCGCCCGGCTActa
Downstream region at tRNA end position 
tttgaaaaac
Secondary structure (Cloverleaf model)
>A172000011	Gln	CTG
                   c      Acta tttgaaaaac
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G *
                    C T G
intron: position=38, length=22 (in A-loop)
TCCCTTGGGCCGAGGGGGAGTG
Intron
Comment/Decision
Genome/Seq. Info.-

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