The detailed information of tRNA gene sequence


Sequence ID>A172000029
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 415523
End posion on genome 415615
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ttaaataatc
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATTCGGGGCTCTGGACCTTAAATGGGGAGAACCCCC
GAGACCGGGGTTCGAATCCCCGCCCGGCTACCA
Downstream region at tRNA end position 
tttctttaat
Secondary structure (Cloverleaf model)
>A172000029	Gln	CTG
                   c      ACCA tttctttaat
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        T     AATGGGGAGAACCCCCGAGAC
                    C   A
                    G + T
                    G + T
                    G - C
                    G - C
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.-

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