The detailed information of tRNA gene sequence


Sequence ID>A172000046
Genome IDCP012158
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum sp. WP30 [CP012158]
Start position on genome 1662268
End posion on genome 1662178
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aatagacaca
tRNA gene sequence 
GCGGCGGTAGTCTAGCCTGGTTTAGGATGGCGGCCTTCCAAGCCGTTGATCCCGGGTTCG
AATCCCGGCCGCCGCAtcg
Downstream region at tRNA end position 
cctcaattct
Secondary structure (Cloverleaf model)
>A172000046	Gly	TCC
                   a      Atcg cctcaattct
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T A        G     TGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=15 (in A-loop)
CGCCACAACGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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