The detailed information of tRNA gene sequence


Sequence ID>A172000050
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2241849
End posion on genome 2241772
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggagcccgtT
tRNA gene sequence 
GCTTCCGGAGTCCCCGTTGGCGAGGGATGCCGGCCTTTCGAGTCGGTGGTCGTGGGTTCA
ATTCCCACCGGAAGCATgc
Downstream region at tRNA end position 
gcttcagagc
Secondary structure (Cloverleaf model)
>A172000050	Glu	TTC
                   T      ATgc gcttcagagc
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     C - G
                     G - C          T T
                    G     C A C C C     A
    T G C C        A      | | | | |     A
  T         C C T G       G T G G G     C
  G         | | | +                 T T
  G         G G A T
    C G A G        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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