The detailed information of tRNA gene sequence


Sequence ID>A177000026
Genome IDCP002565
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix soehngenii GP6 [CP002565]
Start position on genome 254904
End posion on genome 254992
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
aggtgttcta
tRNA gene sequence 
GTCCCGATGGGGTAGTGGATATCCCGGAGGCCTGCGGAGCCTTCAACCCGGGTTCGAATC
CCGGTCGGGACGtga
Downstream region at tRNA end position 
tatttatcct
Secondary structure (Cloverleaf model)
>A177000026	Arg	GCG
                   a      Gtga tatttatcct
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C G G G     C
    G         | | |                 T T
    A       T C C C
      T A          G     CAAC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    G C G
intron: position=38, length=17 (in A-loop)
AGCATTTTCGCGCAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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