The detailed information of tRNA gene sequence


Sequence ID>A177000041
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 651840
End posion on genome 651754
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atggtgtcgt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGCAGAGCGGCGGGCTTTTAACCCGTTGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGcca
Downstream region at tRNA end position 
ccccgcctcg
Secondary structure (Cloverleaf model)
>A177000041	Lys	TTT
                   t      Gcca ccccgcctcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=13 (in A-loop)
ACCTATGGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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