The detailed information of tRNA gene sequence


Sequence ID>A178000006
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 233009
End posion on genome 232897
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cggcgcgagc
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTAGAGCGGCGGGCTCTTACCCCGCGGAAGTCCCGGGTTCG
AATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
caaaacagcc
Secondary structure (Cloverleaf model)
>A178000006	Lys	CTT
                   c      GCCA caaaacagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     GGAAGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A *
                    C T T
intron: position=38, length=34 (in A-loop)
ACCCGTAGAGGGGTTTTGAGGGGCTGCGTCCTGG
Intron
Comment/Decision
Genome/Seq. Info.-

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