The detailed information of tRNA gene sequence


Sequence ID>A178000160
Genome IDCP002069
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanohalobium evestigatum Z-7303 [CP002069]
Start position on genome 508894
End posion on genome 508795
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
gggctgtaat
tRNA gene sequence
GGGCTCGTAGGGTAGTCAGGACATCCTAATGGGCTTCGGACCCATTGACCCGTGTTCAAA
TCGCGGCGAGCCCGCCA
Downstream region at tRNA end position
tttttttctg
Secondary structure (Cloverleaf model)
>A178000160	Arg	TCG
                   t      GCCA tttttttctg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G C G C     A
    C T G A        A      | | | + |     A
  A         T G G G       C C G T G     C
  G           | | +                 T T
  G         T C C T
    A C A          A     TGAC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    T C G
intron: position=38, length=23 (in A-loop)
TGCAACAATAAAGTTGCGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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