The detailed information of tRNA gene sequence


Sequence ID>A178000315
Genome IDCP003243
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella conradii HZ254 [CP003243]
Start position on genome 554718
End posion on genome 554810
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttataatcaa
tRNA gene sequence 
GCCCCTGTGGCTCAGATGGTTAGAGCGGCTGACATGTAATCAGCACGTCGCAAGTTCAAG
CCTTGCCGGGGGCTCta
Downstream region at tRNA end position 
aaattttatt
Secondary structure (Cloverleaf model)
>A178000315	Thr	TGT
                   a      TCta aaattttatt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          C G
                    T     C G T T C     A
      A G A        G      | | | | |     A
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ACGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  A       A *
                    T G T
intron: position=38, length=18 (in A-loop)
ATGAGTTTCTTACATGGC
Intron
Comment/Decision
Genome/Seq. Info.-

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