The detailed information of tRNA gene sequence


Sequence ID>A179000442
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 432071
End posion on genome 431980
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgacctttt
tRNA gene sequence 
GGGCCGGTAGCTCAGCAAGGTAGAGCGGCGGGCTCCAGACCCGAAGGTCGGGGGTTCAAA
TCCCTCCCGGCCCAcca
Downstream region at tRNA end position 
gttttcgctt
Secondary structure (Cloverleaf model)
>A179000442	Trp	CCA
                   t      Acca gttttcgctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    A       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G   A
                    C - G
                    G - C
                   *G - C
                    G - C
                  C       A
                  T       G
                    C C A
intron: position=31, length=18
TCTCTTAGAGAGGTCGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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