The detailed information of tRNA gene sequence


Sequence ID>A17A000364
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 1163399
End posion on genome 1163518
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position
cccattgcat
tRNA gene sequence
AGCCCCGTGGTGTAGTGGTCAAGCATCGGGGACTCTGGATCCCTGGACGGAGGTTCGAAT
CCTCCCGGGGCTGctt
Downstream region at tRNA end position
tttcaaattt
Secondary structure (Cloverleaf model)
>A17A000364	Gln	CTG
                   t      Gctt tttcaaattt
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     G
    G       T G T G       G G A G G     C
    G       + | | +                 T T
    T       G C A T
      C A A        C     GGAC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C T G
intron: position=38, length=47 (in A-loop)
CGAAGCCCCTTTAAAAAGGTGCTTTATCCCCAAAGGGCTTCGGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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