The detailed information of tRNA gene sequence


Sequence ID>A17A000939
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 345431
End posion on genome 345534
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttagaagga
tRNA gene sequence 
GCCGCCGTAGTATAGCCCGGTCAAGTATGCGGGCCTCTCGAGTGCGGGACACCCGGGTTC
AAATCCCGGCGGCGGCACta
Downstream region at tRNA end position 
ggaataaagt
Secondary structure (Cloverleaf model)
>A17A000939	Glu	CTC
                   a      ACta ggaataaagt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     GGACAC
                    C - G
                    G - C
                    G   G
                    G + T
                    C - G
                  C       A *
                  T       G
                    C T C
intron: position=39, length=26 (in A-loop)
GCCCGTGACACCCTAGGCCCGTGAGG
Intron
Comment/Decision
Genome/Seq. Info.-

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