The detailed information of tRNA gene sequence


Sequence ID>A17A001067
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 618553
End posion on genome 618662
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gaaacccctt
tRNA gene sequence 
GGGCCCGTAGCGCAGTTAGGAAGCGCGGCGGCCTTCTAAGCCGCAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGcca
Downstream region at tRNA end position 
tcaaaacatt
Secondary structure (Cloverleaf model)
>A17A001067	Arg	TCT
                   t      Gcca tcaaaacatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       C G C G       C C G G G     C
    A       | | | |                 T T
    G       G C G C
      G A A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=36 (in A-loop)
GGCCGAAAAACCGCGAACAACACAAAACACGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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