The detailed information of tRNA gene sequence


Sequence ID>A17A001106
Genome IDCP006965
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus paralvinellae ES1 [CP006965]
Start position on genome 1061594
End posion on genome 1061698
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgcgggcat
tRNA gene sequence 
GCCGGGGTAGCTTAGCCTGGTCAAAGCGCCCGGCTCATAACCGGGAGATCCGGGGTTCGA
AGCCCCGCCCCGGCAcca
Downstream region at tRNA end position 
taacaaactt
Secondary structure (Cloverleaf model)
>A17A001106	Met	CAT
                   t      Acca taacaaactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          G A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  T         T T C G       C G G G G     C
  G         | | | |                 T T
  G         A A G C
    T C A          G     AGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=30 (in A-loop)
GGGCGACTCCCCTTCGGGGGAGCCTGAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK