The detailed information of tRNA gene sequence


Sequence ID>A17A001682
Genome IDCP021324
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosomarinus catalina SPOT01 [CP021324]
Start position on genome 315644
End posion on genome 315529
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catatagtat
tRNA gene sequence 
GCCGGGGTAGCTCAGCCTGGTTAGAGTGCCAGACTCATAATCTGGAGGTCGCGAGTTCGA
AACTCGCCCCCGGCACac
Downstream region at tRNA end position 
agattattct
Secondary structure (Cloverleaf model)
>A17A001682	Met	CAT
                   t      ACac agattattct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          A A
                    T     C G C T C     A
    C C G A        A      | | | | |     G
  T         C T C G       G C G A G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                   *G - C
                    A - T
                  C       A
                  T       A
                    C A T
intron: position=31, length=40
TTCAATTGGTAAACTCTAACGGTTCTCCAACTAAGGCAAT
Intron
Comment/Decision
Genome/Seq. Info.-

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