The detailed information of tRNA gene sequence


Sequence ID>A17A001323
Genome IDCP010868
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus piranensis D3C [CP010868]
Start position on genome 679867
End posion on genome 679753
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catatactat
tRNA gene sequence 
GCCGGGGTAGCTCAGCCTGGTTAGAGTGCCAGTTTCATAATCTGGAGGTCGCGAGTTCGA
AACTCGCCCCCGGCACac
Downstream region at tRNA end position 
aaattggttt
Secondary structure (Cloverleaf model)
>A17A001323	Met	CAT
                   t      ACac aaattggttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          A A
                    T     C G C T C     A
    C C G A        A      | | | | |     G
  T         C T C G       G C G A G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T   T
                  T*      A
                  T       A
                    C A T
intron: position=33, length=39 (in A-loop)
ACTTGGTAGACTCTAGCGGTTCTCCAACTAAGGCAATAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK