The detailed information of tRNA gene sequence


Sequence ID>A179000046
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 1018433
End posion on genome 1018290
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
gacttgtagt
tRNA gene sequence
GGGCCCGTAGCTCAGCCAGGCAGAGCGGCGGGCTCCAGACCCGTAGGTCAGGGGTTCGAA
TCCCCTCGGGCCCActa
Downstream region at tRNA end position
cttttattct
Secondary structure (Cloverleaf model)
>A179000046	Trp	CCA
                   t      Acta cttttattct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    C       C T C G       A G G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    G + T
                    C - G
                    G - C
                   *G - C
                    G - C
                  C       A
                  T       G
                    C C A
intron: position=31, length=18
ACGCCTCTGGCGGCCGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK