The detailed information of tRNA gene sequence


Sequence ID>A179000545
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1341704
End posion on genome 1341594
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agcttcacga
tRNA gene sequence 
GGGCCCGTAGCGCAGTCAGGAAGCGCGGCGGCCTTCTAAGCCGCAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGctc
Downstream region at tRNA end position 
atattctagc
Secondary structure (Cloverleaf model)
>A179000545	Arg	TCT
                   a      Gctc atattctagc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    C       C G C G       C C G G G     C
    A       | | | |                 T T
    G       G C G C
      G A A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C*      A
                  T       A
                    T C T
intron: position=33, length=20 (in A-loop)
ACGCTCTAGGAGCGCCGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

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