The detailed information of tRNA gene sequence


Sequence ID>A179000546
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1306041
End posion on genome 1305930
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttggaaagcg
tRNA gene sequence 
GGGCCCGTGGCGTAGCCAGGAAGCGTGGCGGCCTCCGGAGCCGTAGGTCCCGGGTTCAAA
TCCCGGCGGGCCCGctt
Downstream region at tRNA end position 
cgagacgagt
Secondary structure (Cloverleaf model)
>A179000546	Arg	CCG
                   g      Gctt cgagacgagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       T G C G       C C G G G     C
    A       + | | +                 T T
    G       G C G T
      G A A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C*      A
                  T       G
                    C C G
intron: position=33, length=20 (in A-loop)
ACGCTCTACTAGCGCCGCAC
Intron
Comment/Decision
Genome/Seq. Info.-

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