The detailed information of tRNA gene sequence


Sequence ID>W131240722
Genome IDBAOK01000001
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesalpha proteobacterium Mf 1.05b.01 [BAOK]
Start position on genome 1328721
End posion on genome 1328645
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttcgtttta
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGTTAGAGCGCTGGCCTGTCACGCCAGAGGCCGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
ttttttctca
Secondary structure (Cloverleaf model)
>W131240722	Asp	GTC
                   a      GCCA ttttttctca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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