The detailed information of tRNA gene sequence


Sequence ID>W131237482
Genome IDAUOO01000260
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. JGI 0001002-I20 [AUOO]
Start position on genome 3290
End posion on genome 3365
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cggggcgcaa
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAGGGTCGGCGGTTCGAGC
CCGTCACCGCCCACCA
Downstream region at tRNA end position 
tatcgacgat
Secondary structure (Cloverleaf model)
>W131237482	Val	TAC
                   a      ACCA tatcgacgat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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