The detailed information of tRNA gene sequence


Sequence ID>C171033413
Genome IDCP014782
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella psychrophila WP2 [CP014782]
Start position on genome 3676842
End posion on genome 3676752
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcggcgttc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCACCGGTCTTGAAAACCGGCACGGGTTTATAGCCC
GTCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
cattcagata
Secondary structure (Cloverleaf model)
>C171033413	Ser	TGA
                   c      GCCA cattcagata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G A C G       T A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CACGGGTTTATAGCCCGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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