The detailed information of tRNA gene sequence


Sequence ID>C171050557
Genome IDCP016757
Search identical group
Phylum/ClassSynergistota
SpeciesCloacibacillus porcorum CL-84 [CP016757]
Start position on genome 2128474
End posion on genome 2128378
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcgttgattc
tRNA gene sequence 
GGAGGTGCGTTTCAGCTGGTGCTGGGCCCGGACTTCAAATCCGGTGTGGGTGGGTAACGC
CCGTCCAGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
tttaacaaaa
Secondary structure (Cloverleaf model)
>C171050557	SeC(p)	TCA
                   c      GCCA tttaacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     C   A          T T
                    G     C A C C C     A
      T C G        T      | | | | |     G
    G       A C T T       G T G G G     C
    G       | | + +                 T T
    T       T G G G
      G C          C     TGTGGGTGGGTAACGCCCGTCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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