The detailed information of tRNA gene sequence


Sequence ID>C171060594
Genome IDCP017305
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobaculum limnaeum DSM 1677 [CP017305]
Start position on genome 338486
End posion on genome 338413
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccatcacgat
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCATTTGCATGGCATGCAAAGGGTCAGGAGTTCGAGT
CTCCTTAGCTCCACac
Downstream region at tRNA end position 
tcaagatatg
Secondary structure (Cloverleaf model)
>C171060594	Ala	GGC
                   t      ACac tcaagatatg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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