The detailed information of tRNA gene sequence


Sequence ID>C171072745
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 1058887
End posion on genome 1058962
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttcaacatag
tRNA gene sequence 
GCTCACGTAGCTCAGTCGGTAGAGCACATCCTTGGTAAGGATGAGGTCACCGGTTCAAGT
CCGGTCGTGAGCTCGA
Downstream region at tRNA end position 
gtttttttta
Secondary structure (Cloverleaf model)
>C171072745	Thr	GGT
                   g      TCGA gtttttttta
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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