The detailed information of tRNA gene sequence


Sequence ID>C171072747
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 1222185
End posion on genome 1222259
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttcatgggat
tRNA gene sequence 
GGGCGGTTAGCTCAGCTGGTTAGAGCGCTACGCTCACATCGTAGAGGTCACAGGTTCGAG
TCCTGTACCGCCCACgt
Downstream region at tRNA end position 
cgttcaaaaa
Secondary structure (Cloverleaf model)
>C171072747	Val	CAC
                   t      ACgt cgttcaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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