The detailed information of tRNA gene sequence


Sequence ID>C171072766
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 3698751
End posion on genome 3698663
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgaaataatt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGACCCTGTTTCGGGG
TCCGTGGGTTCGAATCCCACCCTCTCCGCat
Downstream region at tRNA end position 
gtactacacg
Secondary structure (Cloverleaf model)
>C171072766	Ser	CGA
                   t      GCat gtactacacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGACCCTGTTTCGGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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