The detailed information of tRNA gene sequence


Sequence ID>C171088520
Genome IDCP019038
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMassilia putida 6NM-7 [CP019038]
Start position on genome 3908834
End posion on genome 3908758
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggctgtctt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCCGGTAGCGCATCTGGTTTGGGACCAGAGGGTCCAAGGTTCGAA
TCCTTGTACTCCGACCA
Downstream region at tRNA end position 
gtatatcaag
Secondary structure (Cloverleaf model)
>C171088520	Pro	TGG
                   t      ACCA gtatatcaag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T          T A
                    T     G T T C C     A
      C G A        A      | | | | |     G
    C       C G C G       C A A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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