The detailed information of tRNA gene sequence


Sequence ID>C171092176
Genome IDCP019322
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens PSBB040 [CP019322]
Start position on genome 885399
End posion on genome 885310
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ggccggttcc
tRNA gene sequence
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACCGGAAACGGTA
TCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position
cctttagaat
Secondary structure (Cloverleaf model)
>C171092176	Ser	GGA
                   c      GCCA cctttagaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACCGGAAACGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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