The detailed information of tRNA gene sequence


Sequence ID>C171105877
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 3119974
End posion on genome 3119900
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcgcctgcct
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCGTCTGCTTTGGGAGCAGAAGGTCGTCGGTTCGAA
TCCGGCCGCCCCGACat
Downstream region at tRNA end position 
tgccggcctc
Secondary structure (Cloverleaf model)
>C171105877	Pro	TGG
                   t      ACat tgccggcctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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