The detailed information of tRNA gene sequence


Sequence ID>C171105888
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 1435677
End posion on genome 1435602
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cacgcgcccg
tRNA gene sequence 
GCGGGAGTAGCTCAGATGGTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAAT
CCCGTCTCCCGCTCCA
Downstream region at tRNA end position 
gacattagca
Secondary structure (Cloverleaf model)
>C171105888	Gly	TCC
                   g      TCCA gacattagca
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G C C C     A
      A G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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