The detailed information of tRNA gene sequence


Sequence ID>C171129740
Genome IDLT630287
Search identical group
Phylum/ClassBacillota
SpeciesLigilactobacillus acidipiscis ACA-DC 1533 [LT630287]
Start position on genome 1016032
End posion on genome 1016121
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacttattat
tRNA gene sequence 
GGAGGATTACCCAAGTCTGGCTGAAGGGAACGGTCTTGAAAACCGTCAGGTGGGTAAAAC
CACGCAAGAGTTCGAATCTCTTATCCTCCTttt
Downstream region at tRNA end position 
ttatattatc
Secondary structure (Cloverleaf model)
>C171129740	Ser	TGA
                   t      Tttt ttatattatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C T C     A
    C T G A        A      | | | | |     G
  T         A C C C       A A G A G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGTGGGTAAAACCACGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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