The detailed information of tRNA gene sequence


Sequence ID>C171131101
Genome IDLT799839
Search identical group
Phylum/ClassBacillota
SpeciesClostridium chauvoei JF4335 [LT799839]
Start position on genome 28280
End posion on genome 28370
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtgagacgt
tRNA gene sequence 
GGAAAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTACCTTTGCGGGT
ACCCAGGGTTCGAATCCCTGTCTTTCCGCCA
Downstream region at tRNA end position 
tttttttgtc
Secondary structure (Cloverleaf model)
>C171131101	Ser	TGA
                   t      GCCA tttttttgtc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       C A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTACCTTTGCGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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