The detailed information of tRNA gene sequence


Sequence ID>C172000021
Genome IDCP013396
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia cenocepacia FL-5-3-30-S1-D7 [CP013396, CP013397]
Start position on genome 977641
End posion on genome 977736
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttttcccgc
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCCGGGCTTCAAACTCGGTTGGGGGTGTCAGACA
CTCCCGGGTCAGTTCGACTCTGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tttccggctt
Secondary structure (Cloverleaf model)
>C172000021	SeC	TCA
                   c      GCCA tttccggctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G T C     A
      C C T        T      | + | | |     G
    G       A T G C       G T C A G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTGGGGGTGTCAGACACTCCCGG
                    C - G
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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